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Infection, Genetics and Evolution
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Volume 68, Pages 1-286 (March 2019)
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1. Editorial Board
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2. CCR5 gene editing – Revisiting pros and cons of CCR5 absence
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Joel Henrique Ellwanger, Valéria de Lima Kaminski, José Artur Bogo Chies.
3. Prediction of HIV integrase resistance mutation using in silico approaches
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Heitor Horlando Sampaio Araujo da Silva, Natalia Pereira, Lucas Brandão, Sergio Crovella, Ronald Moura.
3. Investigation of the virulence and genomics of Aeromonas salmonicida strains isolated from human patients
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Antony T. Vincent, Ana Fernández-Bravo, Marta Sanchis, Emilio Mayayo, Steve J. Charette.
5. Oropouche orthobunyavirus: Genetic characterization of full-length genomes and development of molecular methods to discriminate natural reassortments
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Márcio Roberto Teixeira Nunes, William Marciel de Souza, Nazir Savji, Mário Luís Figueiredo, Gustavo Palacios.
6. The genetic divergences of codon usage shed new lights on transmission of hepatitis E virus from swine to human
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Jian-hua Zhou, Xue-rui Li, Xi Lan, Sheng-Yi Han, Qiuwei Pan.
7. Differentiation between persistent infection/colonization and re-infection/re-colonization of Mycobacterium abscessus isolated from patients in Northeast Thailand
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Irin Kham-ngam, Ploenchan Chetchotisakd, Pimjai Ananta, Prajaub Chaimanee, Kiatichai Faksri.
8. Detection of novel astroviruses among rodents of Gabon, Central Africa
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Illich Manfred Mombo, Eloïse Suquet, Larson Boundenga, Amandine Mveang-Nzoghe, Virginie Rougeron.
9. Recombinant noroviruses detected in Mid-West region of Brazil in two different periods 2009–2011 and 2014–2015: Atypical breakpoints of recombination and detection of distinct GII.P7-GII.6 lineages
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Nathânia Dábilla, Tâmera Nunes Vieira Almeida, Fernanda Craveiro Franco, Marielton dos Passos Cunha, Menira Souza.
10. Detection and genetic characterization of kobuvirus in cats: The first molecular evidence from Northeast China
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Ting-Jiang Niu, Shuai-Shu Yi, Xin Wang, Lei-Hua Wang, Xue-Gui Hu.
11. A novel approach for the identification and phylogenetic delineation of human Mycoplasma species and strains using genomic segment sequence analysis
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Orville St.E. Roachford, Karen E. Nelson, Bidyut R. Mohapatra.
12. Genetic variation in TLR pathway and the risk of pulmonary tuberculosis in a Moldavian population
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Alexander Varzari, Igor V. Deyneko, Iuri Vladei, Harald Grallert, Thomas Illig.
13. Antigenic relationship among zoonotic flaviviruses from Italy
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Alessio Lorusso, Valeria Marini, Annapia Di Gennaro, Gaetano Federico Ronchi, Daniel L. Horton.
14. Genetic susceptibility to Tuberculosis: Interaction between HLA-DQA1 and age of onset
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Nelson Leung-sang Tang, Xingyan Wang, Kwok Chiu Chang, Chiu-yeung Chan, Mamie Hui.
15. Potential effects of hepatitis E virus infection in swine on public health in China
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Jian-hua Zhou, Youjun Shang, Xiao-an Cao, Yi-ning Wang, Xi Lan.
16. Recombination in lineage 1, 3, 5 and 8 of porcine reproductive and respiratory syndrome viruses in China
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Jiankui Liu, Chunhua Wei, Zhifeng Lin, Jianlin Fan, Xiaoyan Yang.
17. Co-infection status of classical swine fever virus (CSFV), porcine reproductive and respiratory syndrome virus (PRRSV) and porcine circoviruses (PCV2 and PCV3) in eight regions of China from 2016 to 2018
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Nanhua Chen, Yucheng Huang, Mengxue Ye, Shuai Li, Jianzhong Zhu.
18. Evolutionary and functional studies on microsporidian ATP-binding cassettes: Insights into the adaptation of microsporidia to obligated intracellular parasitism
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Qiang He, Charles R. Vossbrinck, Qiong Yang, Xian-Zhi Meng, Tian Li.
19. Characterization of vanM carrying clinical Enterococcus isolates and diversity of the suppressed vanM gene cluster
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Lingyan Sun, Tingting Qu, Danying Wang, Yan Chen, Yunsong Yu.
20. Evolution and diversity of the EMA families of the divergent equid parasites, Theileria equi and T. haneyi
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L.N. Wise, L.S. Kappmeyer, D.P. Knowles, S.N. White.
21. Characterization of a moderately pathogenic pseudorabies virus variant isolated in China, 2014
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Mingming Zhou, Xiangju Wu, Dandan Jiang, Chao Sui, Yijun Du.
22. Correlation between Ureaplasma spp. sub-group 1 and preterm pre-labour rupture of membranes revealed by an eMLST scheme
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Yingying Kong, Tingting Yang, Ting Yang, Zhi Ruan, Jun Zhang.
23. Genetic diversity patterns of Haemonchus contortus isolated from sheep and goats in Bangladesh
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Anita Rani Dey, Zhongze Zhang, Nurjahan Begum, Md. Abdul Alim, Mohammad Zahangir Alam.
24. Identification of human papillomavirus type 16 variants circulating in the Calabria region by sequencing and phylogenetic analysis of HPV16 from cervical smears
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Luisa Galati, Michele Equestre, Roberto Bruni, Luisa Accardi, Paola Di Bonito.
25. A meta-analysis of association of Human Leukocyte Antigens A, B, C, DR and DQ with Human Papillomavirus 16 infection
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Muthumeenakshi Bhaskaran, GaneshPrasad ArunKumar.
26. Molecular features associated with the adaptive evolution of Infectious Salmon Anemia Virus (ISAV) in Chile
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Constanza Cárdenas, Nicolás Ojeda, Álvaro Labra, Sergio H. Marshall.
27. Selective sweep and phylogenetic models for the emergence and spread of pyrimethamine resistance mutations in Plasmodium vivax
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Ayaz Shaukat, Qasim Ali, Timothy Connelley, Muhammad Azmat Ullah Khan, Umer Chaudhry.
28. Genomic characterization of uncommon human G3P[6] rotavirus strains that have emerged in Kenya after rotavirus vaccine introduction, and pre-vaccine human G8P[4] rotavirus strains
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Ernest Apondi Wandera, Satoshi Komoto, Shah Mohammad, Tomihiko Ide, Yoshio Ichinose.
29. 1H nuclear magnetic resonance-based metabolic profiling of cerebrospinal fluid to identify metabolic features and markers for tuberculosis meningitis
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Peixu Zhang, Weiguanliu Zhang, Yue Lang, Yan Qu, Li Cui.
30. Genome-wide analysis of the ovodefensin gene family: Monophyletic origin, independent gene duplication and presence of different selection patterns
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Long Zhang, Dongmei Chen, Lintian Yu, Yi Wei, Caiquan Zhou.
31. Transcriptional activity of human endogenous retroviruses is higher at birth in inversed correlation with gestational age
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Massimiliano Bergallo, Ilaria Galliano, Alice Pirra, Valentina Daprà, Pier-Angelo Tovo.
32. Nycteria and Polychromophilus parasite infections of bats in Central Gabon
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Sascha P. Rosskopf, Jana Held, Markus Gmeiner, Benjamin Mordmüller, Juliane Schaer.
33. Detection of three novel atypical porcine pestivirus strains in newborn piglets with congenital tremor in southern China
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Xin Zhang, Rui Dai, Qunhui Li, Qingfeng Zhou, Feng Chen.
34. Isolation and phylogenetic analysis of an emerging Senecavirus A in China, 2017
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Cun Liu, Xiubo Li, Lin Liang, Jinxiang Li, Shangjin Cui.
35. Sub-subgenotype 2.1c isolates of classical swine fever virus are dominant in Guangdong province of China, 2018
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Chaonan Xing, Zongji Lu, Jianfeng Jiang, Liangzong Huang, Wenjie Gong.
36. Genomic epidemiological investigation of a Streptococcus suis outbreak in Guangxi, China, 2016
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Wenhua Huang, Mingliu Wang, Huaijie Hao, Ruifu Yang, Yongqiang Jiang.
37. Genetic diversity of human parechoviruses in stool samples, Germany
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Corinna Pietsch, Uwe G. Liebert
38. Mitochondrial DNA reveals species composition and phylogenetic relationships of hookworms in northeastern Brazil
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Kerla Joeline Lima Monteiro, Lauren Hubert Jaeger, Beatriz Coronato Nunes, Deiviane Aparecida Calegar, Filipe Anibal Carvalho-Costa.